Document Type

Thesis

Date of Degree Completion

Spring 2007

Degree Name

Bachelor of Science

Department

Chemistry

Committee Chair

Dr. Levente Fabry-Astalos

Second Committee Member

Dr. Andrew A. Piacsek

Abstract

The malarial parasite Plasmodium falciparum is endemic to 50% of the world's population, killing three million people a year, many of whom are children under five years of age. Due in part to the development of malarial resistance to current drug therapies, novel drug targets are being sought. The malarial hemolytic aspartic protease Plasmepsins are such targets of rational drug design.

We are developing a methodology to rapidly generate combinatorial libraries of chemical structures using a one-dimensional representation (Simplified molecular input line entry specification (SMILES)) of a molecule, to automatically generate a minimized three-dimensional representation (SYBYLMOL2), and to screen this library for potential drug candidates using virtual molecular docking software (Molegro Virtual Docker, UCSF DOCK) and a Fuzzy Neural Network (FNN).

Comments

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